PROSITE entry PS51929

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General information about the entry

PURL [info]	https://purl.expasy.org/prosite/signature/PS51929
Entry name [info]	COV_N_CTD
Accession [info]	PS51929
Entry type [info]	MATRIX
Date [info]	07-OCT-2020 CREATED; 07-OCT-2020 DATA UPDATE; 29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info]	PDOC51928
Associated ProRule [info]	PRU01277

Name and characterization of the entry

Description [info]

Coronavirus nucleocapsid (CoV N) protein C-terminal (CTD) domain profile.

Matrix / Profile [info]

/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=115;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=110;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.4789083; R2=0.0098007; TEXT='-LogE';
/CUT_OFF: LEVEL=0; SCORE=870; N_SCORE=11.0; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=411; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: M0=-37; D=-150; I=-150; B1=-1000; E1=-1000; MI=-380; MD=-380; IM=-380; DM=-380;

...

                A    C    D    E    F    G    H    I    K    L    M    N    P    Q    R    S    T    V    W    Y
/I:         B1=0; BI=-380; BD=-380;
/M: SY='T';  M=  44, -71, -44, -48, -79, -39, -69, -73, -34, -76, -46, -29,  20, -61, -13,  48,  53, -64, -86, -74;
/M: SY='K';  M= -16, -83, -15, -15, -85, -51, -64, -80,  61, -82, -71,   6,  54,  22,  24, -21, -29, -45, -82, -74;
/M: SY='E';  M=  23, -77,  -6,  43, -84, -59, -62, -79,  36, -79, -45,  12, -35,  21,  -8,  21, -11, -56, -84, -74;
/M: SY='M';  M=  -2, -77,  13, -13, -49, -58, -68, -21,  14, -65,  36, -17,  24,  -4, -11,  10,  18,  22, -86, -70;
/M: SY='A';  M=  37, -11, -48, -14, -80, -52,  22, -69,  11, -72, -20, -31,  33,  26,  15, -18,   4,   1, -85, -71;
/M: SY='H';  M=  17, -81, -14, -19, -81, -71,  47, -42,  29, -76, -67, -37,  31,  27,  39, -14,  -3, -35, -85, -68;
/M: SY='K';  M= -25, -82,  19,  36, -83, -73,  -7, -81,  53, -58, -72,  -2, -12, -26,  42,   0, -41, -46, -85, -72;
/M: SY='Q';  M= -11, -80, -63, -33, -76, -73, -61,  16,   2, -42,  31,  34, -26,  75,  12, -43,  -2, -20, -82, -68;
/M: SY='M';  M=   9, -76,  22, -22, -18, -75, -21, -40,   6,  29,  41,   0, -77,  -9, -65, -31,   1, -16, -77,  12;
/M: SY='N';  M= -33,  38,  29,  32, -81, -23, -25, -36,  22, -35, -70,  43, -33,  27, -58,   0, -24, -53, -89, -74;
/M: SY='K';  M= -37, -82, -38, -51, -79, -74,  17, -35,  85, -30, -66,   7, -27, -26,  33, -62, -63, -74, -80, -68;
/I:         I=-21; MD=-53;
/M: SY='P';  M= -50, -91, -54, -66, -83, -39,   3, -72, -10, -16,  10, -75,  92, -23, -36, -26, -15, -25, -89, -80; D=-21;
/I:         I=-21; MI=0; MD=-53; IM=0; DM=-53;
/M: SY='R';  M= -24, -87, -32,  27, -75, -85,  38, -20,  -8, -58, -17, -68, -56, -58,  59, -69, -21,   3,  -4,   4; D=-21;
/I:         I=-21; DM=-53;
/M: SY='W';  M= -40, -96, -37, -69, -30, -79,  60, -84, -68, -81, -75, -74,  26,  29,  -8,  -8, -24, -88, 129, -51; D=-21;
/I:         I=-21; DM=-53;
/M: SY='K';  M= -72, -87, -66, -27, -36, -78, -68, -86,  88, -84, -74, -42, -74,  -9,  10, -31, -68, -84,  65, -67; D=-21;
/I:         I=-21; DM=-53;
/M: SY='R';  M= -38, -86, -68, -56, -79, -80, -60, -83,  16, -79, -68, -61, -19, -47, 102, -65, -32, -46,  13, -67;
/M: SY='T';  M= -31, -71, -32, -65, -69, -75, -72, -12,  17, -37, -59,   7, -72, -42, -29,  -8,  69,  43, -89, -69;
/M: SY='P';  M=   8, -82, -48, -66, -25, -73, -74,   3, -51,   4, -61, -73,  90, -70, -31, -22,   9, -25, -81, -73;
/M: SY='H';  M=  -1, -76,   1, -59, -79, -40,  68, -75, -19, -64, -68,  58,  40, -14, -64, -14,  41, -43, -93, -68;
/M: SY='K';  M= -52, -82, -46, -46, -82,  21, -67, -80,  72, -47, -71, -57,  47, -40,   5,   0, -17, -57, -80, -74;
/M: SY='G';  M= -28, -79,  -2,  30, -84,  51,  10, -82,   7, -81, -73,  -3, -69,  25, -62,  22,  -4, -39, -84, -74;
/I:         I=-45; MD=-115;
/M: SY='C';  M= -64,  49, -22,  49,   0,   2, -63, -35,  27, -42, -69,  -5, -73, -30, -38,  13, -63, -47, -75,  27; D=-45;
/I:         I=-45; MI=-115; IM=-115; DM=-115;
/M: SY='N';  M= -63, -75,  37, -26, -82,  -5, -57, -80, -36, -84, -75,  79,  -2, -57,   9,  19,  30, -77, -94, -75;
/I:         I=-42; MI=0; MD=-106; IM=0; DM=-106;
/M: SY='V';  M= -49, -73, -87, -81, -58, -89, -88,  37, -80, -16, -10, -83, -12, -81, -82, -72, -57,  85, -89, -66;
/M: SY='T';  M= -35, -75,  27,  28, -77, -73, -43,   3, -24, -69, -36,   2, -69,  16, -51,   7,  63, -12, -90, -71;
/M: SY='Q';  M=  21, -12, -63, -25, -83, -70, -22, -72,  24, -74, -36, -22, -40,  85,  -4,  -8,  -9, -12, -81, -43;
/M: SY='C';  M=   1, 112, -82, -81,  13, -78, -80, -41, -77, -32,  15,   2, -88, -80, -81, -46, -62,  36,  -7, -68;
/M: SY='F';  M= -80, -78, -91, -87, 110, -88, -29, -54, -82, -22, -55, -81, -91, -90, -79, -79, -72, -60, -45,  40;
/M: SY='G';  M= -55, -37, -70, -82, -87,  96, -77, -92, -75, -89, -79, -56, -74, -73, -83, -55, -73, -43, -80, -83;
/M: SY='P';  M=   0, -85, -69, -48, -81, -73, -69, -74,  33, -15, -30, -23,  87,  -6,  19, -29, -45, -61, -82, -77;
/M: SY='R';  M= -72, -88, -70, -58, -80, -83, -59, -43, -20, -78, -68, -62, -81, -47, 108, -67, -70, -39, -81, -68;
/I:         I=-38; MI=0; MD=-97; IM=0; DM=-97;
/M: SY='D';  M= -62, -83,  60, -46, -87,  45, -67, -85, -44, -87, -79, -13,  27, -35,   2,  30, -50, -41, -90, -78;
/M: SY='P';  M=  -1, -79,  11, -65,  -7,   9, -26, -52, -13,   5, -40, -64,  38, -20, -18, -15,  29, -25, -11, -14;
/M: SY='E';  M= -25, -26, -13,  39,   2,   4,   9, -79, -42, -47, -71,  27, -43,  31, -25,  28, -28, -64,  -8,  -4;
/M: SY='H';  M=  20, -82, -65, -25, -84,  24,  53, -82,  30, -79, -42, -58,  -4,  39,  29, -17, -66, -53, -83, -69;
/M: SY='N';  M= -69, -75, -43, -64, -80, -58, -50, -37, -55, -87, -75, 116, -80, -57, -64, -52, -54, -82, -99, -23;
/M: SY='F';  M= -79,  -4, -94, -89, 107, -90, -75, -51, -85, -16,   2, -84, -92, -93, -82, -80, -72,  -2, -52, -31;
/M: SY='G';  M= -42, -83, -72, -83, -88,  94, -78, -89, -77, -89, -79, -58, -75, -74, -84, -57, -74, -24, -81, -84;
/M: SY='D';  M= -32, -80,  87, -49, -87,   1, -64, -84, -64, -84,  -9, -14, -72, -62, -71,  28,  21, -79, -99, -76;
/M: SY='A';  M=  40, -77,  21, -33, -82,   0, -69, -76, -11, -19, -31, -59, -25,  24, -35,  39, -30, -70, -86, -75;
/M: SY='D';  M= -51, -87,  65,  53, -90, -45, -63, -89,  18, -86, -81, -55, -72,  25, -42, -10, -26, -65, -92, -35;
/M: SY='M';  M= -45, -78, -89, -84,  34, -89, -73,  -8, -80,  40,  78, -82, -86, -77, -80, -76,  10,  -4, -74,   1;
/M: SY='V';  M= -67,  -1, -76,   7, -63, -87, -79,  17, -76,  21, -26,  25, -85, -75, -80, -73, -51,  59, -91, -70;
/M: SY='K';  M=  11, -85, -35,  35, -88, -76, -40, -85,  60, -72, -74, -16, -73,  28,  23, -48, -45, -58, -85, -76;
/M: SY='N';  M= -21, -81, -21,  23, -71, -48,   2, -67,  20,  32, -33,  37, -78,   4, -51, -47,  -9, -68, -86, -34;
/M: SY='G';  M= -58, -86, -73, -85, -92,  94, -80,-100, -79, -95, -84, -59, -77, -76, -86, -58, -77, -93, -83, -87;
/M: SY='V';  M= -36, -75, -79, -78, -34, -81, -80,   6, -75, -55,  39,  -8, -80, -75, -79,   7,  44,  58, -92, -69;
/M: SY='D';  M=  13, -83,  62,  20, -90, -39, -65, -87,  19, -86, -80,  -7, -74,   9, -20,  13, -35, -81, -93, -78;
/I:         I=-45; MD=-115;
/M: SY='D';  M=  48, -82,  81, -53, -56, -44, -24, -84, -68, -83, -79, -56, -77, -66, -74, -60, -48, -76, -89,  14; D=-45;
/I:         I=-45; MI=-115; IM=-115; DM=-115;
/M: SY='P';  M= -68, -90, -43, -60, -90,  12, -73, -85,  50, -90, -77, -66,  91, -63, -60,  -3, -65, -85, -85, -83;
/M: SY='R';  M= -70,   6, -30, -47, -82,  15,  70, -90,  -9, -83, -71,  10, -80,  12,  71, -44, -71, -86, -88, -29;
/M: SY='Y';  M= -77, -84, -88, -86,  67, -88, -66,  -5, -80, -12, -56, -84, -90, -80, -78, -78, -35,  -1,  76,  83;
/M: SY='P';  M=   8, -86, -75, -66, -83, -74, -75, -69, -24, -74,  50, -74,  96, -70, -76, -64,  19, -30, -87, -80;
/M: SY='Q';  M=  39, -18, -68, -53, -87, -70, -64, -16, -57, -74, -65, -29, -14,  96, -44, -32, -29, -40, -83, -72;
/M: SY='M';  M=   5, -79, -91, -84,  -9, -87, -80,  41, -81,  46,  48, -85, -86, -77, -48, -77, -68,  -2,   9, -62;
/M: SY='A';  M=  77, -71, -78, -71, -75, -48, -76, -65, -73,   3,  27, -72, -77, -68, -76,  -4, -61, -59, -84, -75;
/M: SY='E';  M= -32, -85, -35,  71, -46, -54, -59, -51, -50, -79, -73,  22, -71,  33,  24, -11, -40, -53, -81,  10;
/M: SY='L';  M= -74,  22, -85, -80,  18, -88,  28, -48, -80,  63,  39, -38, -14, -36, -78, -79, -70, -54, -74,   7;
/M: SY='V';  M=  39, -13, -82, -51, -67, -77, -85,  12, -76, -33, -55, -76, -80, -76, -80, -62,  15,  65, -90, -72;
/M: SY='P';  M= -74, -99, -74, -63, -93, -75, -77, -81, -70, -92, -78, -81, 120, -74, -83, -71, -66, -86, -87, -91;
/M: SY='T';  M= -56, -74, -62, -69, -81,  37, -27, -51, -66, -81, -74,  32, -72, -64, -73,  56,  56, -72, -91, -76;
/M: SY='P';  M=  16, -78, -72, -64, -79, -72, -74, -43, -67, -71, -66, -66,  56,  36, -72,  14,  42,  26, -88, -76;
/M: SY='A';  M=  60, -74, -69, -63, -83,  -8,  51, -78, -65, -59, -69, -60, -74,  37, -68,  39, -59, -69, -86, -71;
/M: SY='A';  M=  82, -71, -69,   9, -84, -29, -74, -75, -67, -76, -70, -67, -72, -62, -72,   8, -59, -63, -84, -79;
/M: SY='M';  M= -50,  44, -90, -84,  46, -87, -75,   3, -82,  44,  68, -82, -88, -78, -81, -18, -68, -30, -74, -54;
/M: SY='L';  M= -47, -77, -92, -85,  34, -91, -75, -42, -84,  71,  34, -89, -90, -80, -82, -83, -70, -14, -74, -55;
/M: SY='F';  M= -79, -79, -91, -89, 106, -12, -74, -59, -84, -23, -59, -81, -91, -91, -83, -27, -73, -63, -51,   6;
/M: SY='G';  M=   5, -79,  25, -71, -81,  75, -70, -78, -71, -74,  62, -22, -74, -68, -77, -57, -46, -76, -83, -76;
/M: SY='S';  M= -50, -74, -65, -69, -57,  56, -69, -85, -67, -86, -78, -52, -71, -61, -72,  83, -51, -78, -84, -75;
/M: SY='H';  M= -42, -84, -55,  35, -79, -75,  84, -84,  30, -77, -10,  27, -72,  31,  31, -61, -44, -82, -86, -17;
/M: SY='W';  M= -67, -77, -92, -85,  18, -90, -87,  30, -82,  28, -46, -87, -86, -82, -83, -78, -64,  64,  74, -55;
/M: SY='T';  M= -13, -74,   9,  27, -79, -36, -65, -39,   9, -74, -35, -54, -67,  23, -60,  47,  51, -32, -87, -72;
/M: SY='T';  M=  17, -72, -72, -68, -66, -72,  39, -25, -69,  10,  15, -64,  -2, -28, -72,  17,  50,  23, -87, -65;
/M: SY='K';  M= -18, -79, -12,  -9, -79, -53,  -4, -42,  58, -73, -66, -17, -71,  14,  39, -22,  20,   4, -84, -69;
/M: SY='E';  M= -69, -83,  17,  71,   9, -50,  29, -44,  22,  -7,  -4, -62, -36, -32, -58, -66, -66, -38, -81, -38;
/M: SY='Q';  M= -18, -80,   4,  14, -52,  -8,  12, -66,  -3,  -9, -18,  -1, -74,  60,  -2, -11, -20,   5, -83, -40;
/M: SY='G';  M=  16, -79, -12,  -9, -84,  43, -26, -78, -27, -81, -26,  17,  41,  10, -69,  16, -40, -28, -85, -77;
/M: SY='D';  M= -68, -82,  82,  30, -88, -18, -58, -87, -58, -86,  -9,  56, -73, -56, -67,   3, -60, -84,-100, -77;
/M: SY='G';  M=   4, -81,  46,   8, -63,  51, -67, -83, -41, -54,   3,  -4, -37,  11, -70, -12, -15, -78, -87, -77;
/I:         I=-24; MI=0; MD=-60; IM=0; DM=-60;
/M: SY='Y';  M= -67,  -2, -83, -49,  -6, -88, -73,  18, -17,  18,  -4, -78, -84, -75, -75, -72,   5,  51, -71,  52;
/M: SY='W';  M= -52, -84, -60,  56,  -2, -80,  25, -20, -31, -36,  10, -67, -72,  23, -29, -30,  18, -17,  78, -10;
/M: SY='I';  M= -69, -77, -90, -85, -52, -93, -82,  54, -83,  53, -13, -86, -86, -79, -83, -79, -41,  35, -80, -24;
/M: SY='T';  M= -47, -75, -44, -60, -76, -43, -26, -55,  26, -74, -67,  -9, -70,  14,  27, -37,  81, -46, -86, -18;
/M: SY='Y';  M= -78, -84, -82, -82,  67, -85, -54, -42, -36, -31, -56, -79, -89, -74, -72, -50, -72, -46,   7, 106;
/M: SY='H';  M= -61, -75, -61, -10, -74, -71,  69, -33, -12, -72,  -8,   6, -71, -20, -38,  38,  60, -25, -91, -21;
/M: SY='Y';  M= -46, -24, -75, -78,  30,  38,  28, -70, -52, -51, -63, -68, -82, -70, -73, -65,   5, -71, -52,  93;
/M: SY='K';  M=  21, -76, -22,  -3, -79, -38, -23, -74,  45, -58, -69, -57, -70, -21,  -3,  20,  43, -31, -84, -36;
/M: SY='M';  M= -37, -78, -84, -81, -55, -85, -32,  62, -76, -14,  80, -75, -78, -72, -78, -38,  25,  -2, -76,  24;
/M: SY='K';  M= -67, -80, -33,   3, -74, -78,  10, -68,  54, -29, -66, -17, -13, -24,  23, -39,  38,   1,  10, -20;
/M: SY='V';  M= -65, -75, -26, -80,  26, -61, -82, -22, -37,  28, -16, -54, -86, -80, -79, -53, -62,  72, -82, -59;
/M: SY='P';  M= -56, -89,  60, -52, -87, -37, -66, -84,  29, -88, -79,  -5,  83, -62, -64, -15, -63, -84, -88, -26;
/M: SY='K';  M= -67, -85,   8,  13, -86, -74, -63, -86,  70, -85, -75, -23,  30, -10,  27,  10, -62, -82, -84, -74;
/M: SY='D';  M= -43, -79,  73, -25, -86, -18, -63, -83,  22, -84, -78,  31, -71, -59, -62,   8,  40, -78, -96, -75;
/M: SY='D';  M= -69, -81,  79, -51, -79, -70,  36, -77, -43, -12, -35,  46, -76, -60, -17,   2,  -3, -49, -98, -39;
/M: SY='P';  M= -22, -90, -69, -36, -89, -73, -73, -81,  38, -87, -75, -70, 103, -64, -49, -24, -27, -81, -84, -83;
/M: SY='N';  M=  -9, -80,  24, -21, -86,   8,   8, -53,  10, -84, -74,  74, -75,  43, -35, -18, -60, -81, -91, -74;
/M: SY='F';  M= -76, -78, -86, -84,  79, -88, -65, -51, -80,  34, -50, -81, -89, -80, -78, -75,   0, -33, -52,  67;
/M: SY='E';  M=  -4, -83,  36,  48, -83, -11, -65, -52, -17, -23, -72,  10,  30,  13, -65,  -5, -40, -50, -88, -77;
/M: SY='Q';  M= -16, -79, -25, -13, -74, -75, -64, -35,  31, -10, -63,  22, -56,  36,  30, -28,  21,  -5, -83, -17;
/M: SY='W';  M= -76, -83, -88, -82,  79, -87, -28,  20, -79,  -9, -55, -28, -87,  -2, -78, -78, -72,  -6,  87,  34;
/M: SY='M';  M= -68, -77, -83, -54, -57, -87, -74,  21,  18,  44,  59, -77, -82, -69, -35, -38, -33,  29, -82, -63;
/M: SY='E';  M= -22, -83,  11,  47, -87, -38, -19, -40,  45, -81, -73, -10,   3,  42, -52,   9, -39, -78, -85, -74;
/M: SY='Q';  M=  29, -81, -70,  -5, -46, -51,  -5,  26, -62, -12, -57, -49, -76,  80, -64, -60, -65,   4, -81, -67;
/M: SY='C';  M= -69,  47, -89, -84, -30, -90, -77,  27, -82,  46, -23, -84, -88, -79, -82, -77, -45,  42, -76,  32;
/M: SY='N';  M= -26, -79,  63,   7, -85, -17, -59, -82, -12, -60, -16,  65, -73, -28, -64,  14,  -8, -79, -96, -76;
/M: SY='A';  M=  58, -75, -40,  34, -85, -46, -67, -78,  13, -78, -70, -30, -70,  32, -29,  -8,   1, -68, -84, -76;
/M: SY='Y';  M= -55,  41, -68, -75,  42, -76,  10, -43, -69, -64, -62,  59,   8, -70, -46, -66, -64,   6, -63,  72;
/M: SY='V';  M=   6, -75, -77, -70, -65, -79, -78,  26,  32,  15, -53, -70, -46, -68, -65,  -1,  11,  37, -84, -68;
/M: SY='D';  M= -70, -83,  80, -38, -86, -41, -59, -56,  15, -41, -77,  50, -37, -14,   9, -25, -40, -82, -96, -75;
/M: SY='P';  M=  39, -81, -32, -46, -83,  32, -72, -35, -68, -55,  15, -46,  61,  26, -74, -27, -42, -40, -83, -78;
/M: SY='Y';  M= -15, -39,  -1, -28, -58, -55, -62, -61, -12, -67, -11,  -2, -77, -17, -67,  41,  13,  20, -70,  65;
/M: SY='Q';  M= -48, -29, -36,  -3, -72,   1, -62, -76,  40, -77, -69, -17,   7,  55, -28,  -2,   4, -28, -74,  39;
/M: SY='T';  M= -28, -78,  16,  32,  -7, -50, -34, -41,  10, -59, -14,  14, -72,   3, -42, -20,  36,  16,  -4, -68;
/M: SY='Q';  M=   4, -82, -20,  -2,  42, -37, -29, -70, -16, -44, -66, -50,  42,  44,  20, -25, -26, -22, -75, -61;
/M: SY='P';  M= -46, -87,   4,   2, -88, -50, -66, -81,  12, -69, -73, -12,  78,  46,  -8,   3, -12, -65, -86, -78;
/I:         E1=0; IE=-380; DE=-380;

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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_01 which contains 572'970 sequence entries.

Total number of hits	64 in 64 different sequences
Number of true positive hits	64 in 64 different sequences
Number of 'unknown' hits	0
Number of false positive hits	0
Number of false negative sequences	0
Number of 'partial' sequences	0

Precision (true positives / (true positives + false positives))	100.00 %
Recall (true positives / (true positives + false negatives))	100.00 %

Comments [info]

Taxonomic range [info]	Eukaryotic viruses
Maximum number of repetitions [info]	1
Matrix type [info]	protein_domain
Scaling database [info]	reversed
Author [info]	CJA_Sigrist
Feature key [info]	DOMAIN
Feature description [info]	CoV N CTD
Version [info]	1

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences

64 sequences

NCAP_BC133  (Q0Q4E6), NCAP_BC279  (Q0Q468), NCAP_BC512  (Q0Q462),

NCAP_BCHK3  (Q3LZX4), NCAP_BCHK4  (A3EXA1), NCAP_BCHK5  (A3EXD7), 
NCAP_BCHK9  (A3EXH0), NCAP_BCRP3  (Q3I5I7), NCAP_CVBEN  (Q91A22), 
NCAP_CVBF   (P19902), NCAP_CVBLS  (Q9QAR1), NCAP_CVBLU  (Q8V432), 
NCAP_CVBLY  (Q9QAR8), NCAP_CVBM   (P10527), NCAP_CVBOK  (P26020), 
NCAP_CVBQ   (P59712), NCAP_CVCAI  (P36298), NCAP_CVCAK  (Q04700), 
NCAP_CVCBG  (Q7T6S8), NCAP_CVEN9  (Q9DQX6), NCAP_CVH22  (P15130), 
NCAP_CVHN1  (Q5MQC6), NCAP_CVHN2  (Q14EA6), NCAP_CVHN5  (Q0ZME3), 
NCAP_CVHNL  (Q6Q1R8), NCAP_CVHOC  (P33469), NCAP_CVM1   (P18446), 
NCAP_CVM2   (Q9PY96), NCAP_CVM3   (P18447), NCAP_CVMA5  (P03416), 
NCAP_CVMDV  (Q83360), NCAP_CVMJH  (P03417), NCAP_CVMS   (P18448), 
NCAP_CVP67  (Q8BB23), NCAP_CVPFS  (P05991), NCAP_CVPIA  (Q8JSP4), 
NCAP_CVPPU  (P04134), NCAP_CVPR8  (P33463), NCAP_CVPRM  (P24411), 
NCAP_CVPV   (P59713), NCAP_CVRNJ  (Q9WCD0), NCAP_CVRSD  (Q02915), 
NCAP_CVTIN  (Q9PZ51), NCAP_CVTMI  (Q9PZ50), NCAP_CVTNC  (Q9PZ49), 
NCAP_FIPV   (P25909), NCAP_IBVAR  (Q64960), NCAP_IBVB   (P69596), 
NCAP_IBVBC  (P69597), NCAP_IBVBU  (P69598), NCAP_IBVD1  (Q9J4A3), 
NCAP_IBVDE  (Q9J4B0), NCAP_IBVG   (P32923), NCAP_IBVH1  (Q98WJ7), 
NCAP_IBVH5  (Q98Y32), NCAP_IBVK   (P12648), NCAP_IBVM   (Q82616), 
NCAP_IBVSA  (Q8JMI6), NCAP_IBVV1  (Q96605), NCAP_IBVVI  (Q96598), 
NCAP_MERS1  (K9N4V7), NCAP_PEDV7  (Q07499), NCAP_SARS   (P59595), 
NCAP_SARS2  (P0DTC9)

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Retrieve an alignment of UniProtKB/Swiss-Prot true positive hits:
[Clustal format, color, condensed view] [Clustal format, color]
[Clustal format, plain text] [Fasta format]
Retrieve the sequence logo from the alignment

PDB
[Detailed view]

33 PDB

2CA1; 2CJR; 2GE7; 2GE8; 2GIB; 2JW8; 5EPW; 6WJI; 6WZO; 6WZQ; 6YUN; 6ZCO;
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