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PROSITE entry PS51025


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General information about the entry

PURL [info] https://purl.expasy.org/prosite/signature/PS51025
Entry name [info] PWI
Accession [info] PS51025
Entry type [info] MATRIX
Date [info] 01-FEB-2007 CREATED;
10-MAY-2017 DATA UPDATE;
29-MAY-2024 INFO UPDATE.
PROSITE Doc. [info] PDOC51025
Associated ProRule [info] PRU00627

Name and characterization of the entry

Description [info] PWI domain profile.
Matrix / Profile [info]
/GENERAL_SPEC: ALPHABET='ACDEFGHIKLMNPQRSTVWY'; LENGTH=105;
/DISJOINT: DEFINITION=PROTECT; N1=6; N2=100;
/NORMALIZATION: MODE=1; FUNCTION=LINEAR; R1=2.9050565; R2=0.0245244; TEXT='NScore';
/NORMALIZATION: MODE=-1; FUNCTION=LINEAR; R1=5858.4365234; R2=2.6026201; PRIORITY=1; TEXT='Heuristic 5.0%';
/CUT_OFF: LEVEL=0; SCORE=229; H_SCORE=6454; N_SCORE=8.5; MODE=1; TEXT='!';
/CUT_OFF: LEVEL=-1; SCORE=147; H_SCORE=6241; N_SCORE=6.5; MODE=1; TEXT='?';
/DEFAULT: B1=*; E1=*; MM=*; II=*;
...
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Numerical results [info]

Numerical results for UniProtKB/Swiss-Prot release 2025_01 which contains 572'970 sequence entries.


Total number of hits 14 in 14 different sequences
Number of true positive hits 14 in 14 different sequences
Number of 'unknown' hits 0
Number of false positive hits 0
Number of false negative sequences 1
Number of 'partial' sequences 0
Precision (true positives / (true positives + false positives)) 100.00 %
Recall (true positives / (true positives + false negatives)) 93.33 %

Comments [info]

Taxonomic range [info] Eukaryotes
Maximum number of repetitions [info] 1
Matrix type [info] protein_domain
Scaling database [info] reversed
Author [info] CJA_Sigrist
Feature key [info] DOMAIN
Feature description [info] PWI
Version [info] 5

Cross-references [info]

UniProtKB/Swiss-Prot
True positive sequences
14 sequences

PRPF3_BOVIN (Q2KIA6), PRPF3_CHICK (Q5ZJ85), PRPF3_HUMAN (O43395), 
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UniProtKB/Swiss-Prot
False negative sequences
1 sequence

SWM_DROME   (Q9VIV2)

		
PDB
[Detailed view]
37 PDB

1MP1; 1X4Q; 3JCR; 3V53; 5O9Z; 6AH0; 6AHD; 6FF4; 6FF7; 6QW6; 6QX9; 7ABG;
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